Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.77□□□□□ -0.85
Rfx3P48381 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Rfx3P48381 Gm25125-201ENSMUST00000083340 136 ntBASIC9.77□□□□□ -0.85
Rfx3P48381 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Rfx3P48381 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Rfx3P48381 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Rfx3P48381 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Rfx3P48381 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.77□□□□□ -0.85
Rfx3P48381 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.76□□□□□ -0.85
Rfx3P48381 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Rfx3P48381 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.76□□□□□ -0.85
Rfx3P48381 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Gm7467-201ENSMUST00000185173 652 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Rfx3P48381 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.76□□□□□ -0.85
Rfx3P48381 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Gm9132-201ENSMUST00000210182 832 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Gm29787-201ENSMUST00000222129 849 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Rfx3P48381 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Rfx3P48381 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.76□□□□□ -0.85
Rfx3P48381 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Rfx3P48381 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Rfx3P48381 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.76□□□□□ -0.85
Rfx3P48381 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rfx3P48381 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Rfx3P48381 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Rfx3P48381 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.75□□□□□ -0.85
Rfx3P48381 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Rfx3P48381 Gm14942-201ENSMUST00000119642 336 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 Gm14585-201ENSMUST00000120713 634 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC9.75□□□□□ -0.85
Rfx3P48381 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC9.75□□□□□ -0.85
Rfx3P48381 Gm15881-201ENSMUST00000148792 942 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.75□□□□□ -0.85
Rfx3P48381 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.75□□□□□ -0.85
Rfx3P48381 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms