Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 AC123534.1-202ENSMUST00000224256 1837 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Gm22018-201ENSMUST00000104357 131 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.85□□□□□ -0.83
Nedd8P29595 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.85□□□□□ -0.83
Nedd8P29595 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Gm12390-201ENSMUST00000117897 397 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 Gm15329-201ENSMUST00000121408 155 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Nedd8P29595 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 Gm43184-201ENSMUST00000197247 542 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Nedd8P29595 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Gm9978-201ENSMUST00000069431 3273 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Gm45797-201ENSMUST00000212759 1921 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Pigq-202ENSMUST00000097368 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Nedd8P29595 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 5430416N02Rik-201ENSMUST00000180779 3486 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm37909-201ENSMUST00000193157 2159 ntBASIC9.84□□□□□ -0.83
Nedd8P29595 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Drc3-204ENSMUST00000108723 1917 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nedd8P29595 Lsm6-203ENSMUST00000130325 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nedd8P29595 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.84□□□□□ -0.83
Nedd8P29595 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.84□□□□□ -0.83
Nedd8P29595 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.84□□□□□ -0.83
Nedd8P29595 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm32999-201ENSMUST00000192693 562 ntBASIC9.84□□□□□ -0.83
Nedd8P29595 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm43133-201ENSMUST00000197472 463 ntBASIC9.84□□□□□ -0.83
Nedd8P29595 Gm5865-201ENSMUST00000198713 637 ntBASIC9.84□□□□□ -0.83
Nedd8P29595 Gm44741-201ENSMUST00000207503 2127 ntBASIC9.84□□□□□ -0.83
Nedd8P29595 Gm44551-201ENSMUST00000208804 171 ntBASIC9.84□□□□□ -0.83
Nedd8P29595 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC9.84□□□□□ -0.83
Nedd8P29595 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nedd8P29595 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nedd8P29595 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Nedd8P29595 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nedd8P29595 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.84□□□□□ -0.83
Nedd8P29595 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Baiap3-201ENSMUST00000169109 3630 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Nedd8P29595 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms