Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.39□□□□□ -0.43
Vcam1P29533 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Vcam1P29533 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.39□□□□□ -0.43
Vcam1P29533 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.38□□□□□ -0.43
Vcam1P29533 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Vcam1P29533 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.38□□□□□ -0.43
Vcam1P29533 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Vcam1P29533 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Vcam1P29533 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC12.38□□□□□ -0.43
Vcam1P29533 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC12.38□□□□□ -0.43
Vcam1P29533 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Gm4960-201ENSMUST00000182928 1001 ntBASIC12.38□□□□□ -0.43
Vcam1P29533 Gm7985-201ENSMUST00000183329 981 ntBASIC12.38□□□□□ -0.43
Vcam1P29533 Gm18182-201ENSMUST00000191380 1251 ntBASIC12.38□□□□□ -0.43
Vcam1P29533 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.38□□□□□ -0.43
Vcam1P29533 Gm44304-201ENSMUST00000200509 145 ntBASIC12.38□□□□□ -0.43
Vcam1P29533 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC12.38□□□□□ -0.43
Vcam1P29533 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.38□□□□□ -0.43
Vcam1P29533 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC12.38□□□□□ -0.43
Vcam1P29533 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC12.38□□□□□ -0.43
Vcam1P29533 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC12.38□□□□□ -0.43
Vcam1P29533 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC12.38□□□□□ -0.43
Vcam1P29533 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Vcam1P29533 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vcam1P29533 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vcam1P29533 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vcam1P29533 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vcam1P29533 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vcam1P29533 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.37□□□□□ -0.43
Vcam1P29533 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vcam1P29533 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vcam1P29533 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Gm15554-201ENSMUST00000120406 913 ntBASIC12.37□□□□□ -0.43
Vcam1P29533 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.37□□□□□ -0.43
Vcam1P29533 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Gm27444-201ENSMUST00000184157 137 ntBASIC12.37□□□□□ -0.43
Vcam1P29533 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vcam1P29533 Gm8525-201ENSMUST00000189674 861 ntBASIC12.37□□□□□ -0.43
Vcam1P29533 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Gm5311-201ENSMUST00000203518 709 ntBASIC12.37□□□□□ -0.43
Vcam1P29533 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.37□□□□□ -0.43
Vcam1P29533 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.37□□□□□ -0.43
Vcam1P29533 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.37□□□□□ -0.43
Vcam1P29533 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vcam1P29533 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vcam1P29533 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vcam1P29533 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vcam1P29533 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Vcam1P29533 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms