Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Col8a2P25318 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.01□□□□□ -0.97
Col8a2P25318 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Col8a2P25318 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Gm42974-201ENSMUST00000199556 2654 ntBASIC9□□□□□ -0.97
Col8a2P25318 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Gm11996-201ENSMUST00000117538 915 ntBASIC9□□□□□ -0.97
Col8a2P25318 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Gm11957-201ENSMUST00000118304 779 ntBASIC9□□□□□ -0.97
Col8a2P25318 Gm12461-201ENSMUST00000120231 1239 ntBASIC9□□□□□ -0.97
Col8a2P25318 Gm12712-201ENSMUST00000120676 801 ntBASIC9□□□□□ -0.97
Col8a2P25318 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC9□□□□□ -0.97
Col8a2P25318 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Gm27440-201ENSMUST00000184785 107 ntBASIC9□□□□□ -0.97
Col8a2P25318 Gm7255-201ENSMUST00000187371 908 ntBASIC9□□□□□ -0.97
Col8a2P25318 Gm42588-201ENSMUST00000200538 1297 ntBASIC9□□□□□ -0.97
Col8a2P25318 Gm18010-201ENSMUST00000203553 202 ntBASIC9□□□□□ -0.97
Col8a2P25318 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Gm9619-201ENSMUST00000211587 762 ntBASIC9□□□□□ -0.97
Col8a2P25318 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC9□□□□□ -0.97
Col8a2P25318 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC9□□□□□ -0.97
Col8a2P25318 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 AC124581.2-201ENSMUST00000225459 282 ntBASIC9□□□□□ -0.97
Col8a2P25318 CT025679.1-201ENSMUST00000227106 449 ntBASIC9□□□□□ -0.97
Col8a2P25318 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC9□□□□□ -0.97
Col8a2P25318 Gm9791-201ENSMUST00000060997 447 ntBASIC9□□□□□ -0.97
Col8a2P25318 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Gm38271-201ENSMUST00000192296 1603 ntBASIC9□□□□□ -0.97
Col8a2P25318 Gm43167-201ENSMUST00000202001 1606 ntBASIC9□□□□□ -0.97
Col8a2P25318 Gm37580-201ENSMUST00000192408 2800 ntBASIC9□□□□□ -0.97
Col8a2P25318 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9□□□□□ -0.97
Col8a2P25318 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Col8a2P25318 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col8a2P25318 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col8a2P25318 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Col8a2P25318 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC8.99□□□□□ -0.97
Col8a2P25318 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Col8a2P25318 Gm5859-201ENSMUST00000165401 2324 ntBASIC8.99□□□□□ -0.97
Col8a2P25318 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
Col8a2P25318 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms