Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm25053-201ENSMUST00000103982 133 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm25922-201ENSMUST00000104281 130 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm25562-201ENSMUST00000104608 133 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm24679-201ENSMUST00000158762 111 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm17790-201ENSMUST00000191545 1228 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm37365-201ENSMUST00000193109 409 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm25053-202ENSMUST00000199731 132 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm33080-201ENSMUST00000205429 172 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm18944-201ENSMUST00000207672 643 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 AC165260.5-201ENSMUST00000224640 1247 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 AC154757.2-201ENSMUST00000228885 743 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Gm25830-201ENSMUST00000158923 132 ntBASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Gm37751-201ENSMUST00000192440 1198 ntBASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Gm40414-201ENSMUST00000197608 481 ntBASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Gm44216-201ENSMUST00000203942 157 ntBASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Gm7589-201ENSMUST00000085631 534 ntBASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf1bP25119 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1bP25119 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1bP25119 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1bP25119 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf1bP25119 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms