Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
Cdx1P18111 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.77□□□□□ -1.01
Cdx1P18111 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm13812-201ENSMUST00000118061 1347 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Gm13810-201ENSMUST00000118584 1347 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC8.77□□□□□ -1.01
Cdx1P18111 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm45191-201ENSMUST00000205846 5439 ntBASIC8.76□□□□□ -1.01
Cdx1P18111 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Rbm10-203ENSMUST00000084383 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm10874-201ENSMUST00000100526 2355 ntTSL 2 BASIC8.76□□□□□ -1.01
Cdx1P18111 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC8.76□□□□□ -1.01
Cdx1P18111 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm12463-201ENSMUST00000118271 849 ntBASIC8.76□□□□□ -1.01
Cdx1P18111 Gm14724-201ENSMUST00000118400 537 ntBASIC8.76□□□□□ -1.01
Cdx1P18111 Irf9-203ENSMUST00000134863 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm2965-201ENSMUST00000198365 343 ntBASIC8.76□□□□□ -1.01
Cdx1P18111 Gm43916-201ENSMUST00000205062 967 ntBASIC8.76□□□□□ -1.01
Cdx1P18111 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 CT009713.8-201ENSMUST00000225448 560 ntBASIC8.76□□□□□ -1.01
Cdx1P18111 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC8.76□□□□□ -1.01
Cdx1P18111 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Cdh18-207ENSMUST00000226693 2165 ntBASIC8.76□□□□□ -1.01
Cdx1P18111 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC8.76□□□□□ -1.01
Cdx1P18111 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 Dgkeos-204ENSMUST00000178493 1902 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx1P18111 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx1P18111 Gm38359-201ENSMUST00000191884 2225 ntBASIC8.76□□□□□ -1.01
Cdx1P18111 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Gm13140-201ENSMUST00000119840 3151 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Cdx1P18111 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC8.75□□□□□ -1.01
Cdx1P18111 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Cdx1P18111 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 AC108416.1-201ENSMUST00000228755 1558 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Gm11511-201ENSMUST00000118146 540 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
Cdx1P18111 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Gm6548-201ENSMUST00000167498 1165 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
Cdx1P18111 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms