Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.09□□□□□ -0.63
Rc3h2P0C090 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.09□□□□□ -0.63
Rc3h2P0C090 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.09□□□□□ -0.63
Rc3h2P0C090 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.09□□□□□ -0.63
Rc3h2P0C090 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Rc3h2P0C090 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rc3h2P0C090 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gm6677-201ENSMUST00000195100 441 ntBASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gm40414-201ENSMUST00000197608 481 ntBASIC11.08□□□□□ -0.64
Rc3h2P0C090 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.08□□□□□ -0.64
Rc3h2P0C090 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gm44640-201ENSMUST00000206894 247 ntBASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gm19640-201ENSMUST00000214849 464 ntBASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rc3h2P0C090 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.07□□□□□ -0.64
Rc3h2P0C090 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rc3h2P0C090 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rc3h2P0C090 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.07□□□□□ -0.64
Rc3h2P0C090 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Gm12947-201ENSMUST00000116114 420 ntBASIC11.07□□□□□ -0.64
Rc3h2P0C090 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.07□□□□□ -0.64
Rc3h2P0C090 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Gm27956-201ENSMUST00000175604 260 ntBASIC11.07□□□□□ -0.64
Rc3h2P0C090 Gm43097-201ENSMUST00000196867 151 ntBASIC11.07□□□□□ -0.64
Rc3h2P0C090 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rc3h2P0C090 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms