Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Gm12221-201ENSMUST00000125096 1131 ntBASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm15383-201ENSMUST00000121889 1443 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm11231-201ENSMUST00000117895 1706 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm5910-201ENSMUST00000211819 1746 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm8163-201ENSMUST00000122020 1060 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm15727-201ENSMUST00000122416 437 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm6946-201ENSMUST00000182237 987 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm43066-201ENSMUST00000199589 1260 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 CR974487.1-201ENSMUST00000220984 413 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col4a6B1AVK5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Col4a6B1AVK5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col4a6B1AVK5 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col4a6B1AVK5 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC10.9□□□□□ -0.67
Col4a6B1AVK5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col4a6B1AVK5 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm14227-201ENSMUST00000119431 629 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm12733-201ENSMUST00000119871 767 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm28381-201ENSMUST00000188403 193 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm38135-201ENSMUST00000195068 502 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm19228-201ENSMUST00000214030 717 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm10250-201ENSMUST00000090488 482 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm2492-201ENSMUST00000221355 1394 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms