Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm25154-201ENSMUST00000157123 119 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm38038-201ENSMUST00000193803 259 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm44540-201ENSMUST00000205640 354 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm18164-201ENSMUST00000213769 927 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm18166-201ENSMUST00000215557 927 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 AC132384.2-201ENSMUST00000218018 526 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Gm23129-201ENSMUST00000104259 132 ntBASIC12.65□□□□□ -0.38
Scn11aQ9R053 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Gm8464-202ENSMUST00000146697 1142 ntBASIC12.65□□□□□ -0.38
Scn11aQ9R053 Gm4750-201ENSMUST00000151942 1142 ntBASIC12.65□□□□□ -0.38
Scn11aQ9R053 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Gm2716-201ENSMUST00000212350 643 ntBASIC12.65□□□□□ -0.38
Scn11aQ9R053 AC134860.5-201ENSMUST00000225071 1249 ntBASIC12.65□□□□□ -0.38
Scn11aQ9R053 AC163646.3-201ENSMUST00000228879 772 ntBASIC12.65□□□□□ -0.38
Scn11aQ9R053 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC12.65□□□□□ -0.38
Scn11aQ9R053 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.65□□□□□ -0.38
Scn11aQ9R053 Gm10344-201ENSMUST00000193498 1419 ntBASIC12.65□□□□□ -0.38
Scn11aQ9R053 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn11aQ9R053 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Scn11aQ9R053 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Scn11aQ9R053 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scn11aQ9R053 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm12377-201ENSMUST00000118656 252 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm15793-201ENSMUST00000121857 495 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm5766-202ENSMUST00000161633 799 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm26379-201ENSMUST00000178125 138 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 AC242269.1-201ENSMUST00000227020 741 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm4880-201ENSMUST00000207645 1696 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Mir704-201ENSMUST00000102106 77 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm11771-201ENSMUST00000118124 732 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm6276-201ENSMUST00000120159 579 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm28916-201ENSMUST00000186988 699 ntBASIC12.64□□□□□ -0.39
Scn11aQ9R053 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn11aQ9R053 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm45728-201ENSMUST00000211475 2979 ntBASIC12.63□□□□□ -0.39
Scn11aQ9R053 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms