Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chaf1aQ9QWF0 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1aQ9QWF0 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.15□□□□□ -0.46
Chaf1aQ9QWF0 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1aQ9QWF0 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chaf1aQ9QWF0 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Gm4726-201ENSMUST00000135604 736 ntBASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Gm6019-201ENSMUST00000148369 736 ntBASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Mir5120-201ENSMUST00000175020 78 ntBASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Phtf1os-201ENSMUST00000160110 4046 ntBASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Gm37806-201ENSMUST00000194524 6387 ntBASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.14□□□□□ -0.47
Chaf1aQ9QWF0 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Gm13045-201ENSMUST00000119019 712 ntBASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Gm12566-201ENSMUST00000121479 359 ntBASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chaf1aQ9QWF0 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.12□□□□□ -0.47
Chaf1aQ9QWF0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1aQ9QWF0 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms