Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm6423-201ENSMUST00000204315 934 ntBASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm7319-201ENSMUST00000210047 778 ntBASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Upk3aQ9JKX8 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Upk3aQ9JKX8 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.4□□□□□ -0.75
Upk3aQ9JKX8 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Upk3aQ9JKX8 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Upk3aQ9JKX8 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Upk3aQ9JKX8 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.4□□□□□ -0.75
Upk3aQ9JKX8 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm13351-201ENSMUST00000118087 414 ntBASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm14219-201ENSMUST00000120414 288 ntBASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm24346-201ENSMUST00000158712 194 ntBASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm18059-201ENSMUST00000208073 580 ntBASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Upk3aQ9JKX8 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gm12950-201ENSMUST00000121683 417 ntBASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Gm5801-201ENSMUST00000182247 780 ntBASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.38□□□□□ -0.75
Upk3aQ9JKX8 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms