Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Ube4bQ9ES00 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube4bQ9ES00 Gm45797-201ENSMUST00000212759 1921 ntBASIC10.34□□□□□ -0.75
Ube4bQ9ES00 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.34□□□□□ -0.75
Ube4bQ9ES00 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube4bQ9ES00 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube4bQ9ES00 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube4bQ9ES00 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube4bQ9ES00 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube4bQ9ES00 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ube4bQ9ES00 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC10.33□□□□□ -0.75
Ube4bQ9ES00 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 CT009601.1-201ENSMUST00000225567 2705 ntBASIC10.33□□□□□ -0.76
Ube4bQ9ES00 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.33□□□□□ -0.76
Ube4bQ9ES00 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Gm45224-201ENSMUST00000208203 414 ntBASIC10.33□□□□□ -0.76
Ube4bQ9ES00 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.33□□□□□ -0.76
Ube4bQ9ES00 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Osbpl5-202ENSMUST00000119499 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Gm15264-201ENSMUST00000118050 502 ntBASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Irf9-203ENSMUST00000134863 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Gm17376-201ENSMUST00000166016 84 ntBASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Gm7584-201ENSMUST00000175829 940 ntBASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Gm6082-201ENSMUST00000215204 454 ntBASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.32□□□□□ -0.76
Ube4bQ9ES00 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms