Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim34aQ99PP6 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Gm42859-201ENSMUST00000199572 193 ntBASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Gm42710-201ENSMUST00000200608 985 ntBASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Gm30055-201ENSMUST00000203175 803 ntBASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Gm7242-201ENSMUST00000221134 705 ntBASIC13.34□□□□□ -0.27
Trim34aQ99PP6 AC133517.1-201ENSMUST00000225825 594 ntBASIC13.34□□□□□ -0.27
Trim34aQ99PP6 AC161172.1-201ENSMUST00000227801 486 ntBASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Dopey2-207ENSMUST00000227156 7340 ntBASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim34aQ99PP6 Gm12716-201ENSMUST00000120606 1354 ntBASIC13.33□□□□□ -0.27
Trim34aQ99PP6 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim34aQ99PP6 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim34aQ99PP6 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trim34aQ99PP6 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim34aQ99PP6 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Gm7985-201ENSMUST00000183329 981 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Gm37858-201ENSMUST00000192759 1231 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Gm2345-201ENSMUST00000193451 589 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Gm42689-201ENSMUST00000202403 404 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 AC140314.1-201ENSMUST00000219549 554 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 AC133496.1-201ENSMUST00000223891 743 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Gm5424-201ENSMUST00000053865 1240 ntBASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim34aQ99PP6 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms