Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm42710-201ENSMUST00000200608 985 ntBASIC13.37□□□□□ -0.27
RtcbQ99LF4 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Gm19798-201ENSMUST00000201502 457 ntBASIC13.37□□□□□ -0.27
RtcbQ99LF4 Gm18466-201ENSMUST00000209147 499 ntBASIC13.37□□□□□ -0.27
RtcbQ99LF4 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 AC154461.3-201ENSMUST00000224831 573 ntBASIC13.37□□□□□ -0.27
RtcbQ99LF4 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.37□□□□□ -0.27
RtcbQ99LF4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Gm13120-201ENSMUST00000117343 1446 ntBASIC13.37□□□□□ -0.27
RtcbQ99LF4 Gm13104-201ENSMUST00000119651 1446 ntBASIC13.37□□□□□ -0.27
RtcbQ99LF4 A1cf-204ENSMUST00000224564 1432 ntBASIC13.37□□□□□ -0.27
RtcbQ99LF4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RtcbQ99LF4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.36□□□□□ -0.27
RtcbQ99LF4 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 AC154640.1-203ENSMUST00000228316 1618 ntBASIC13.36□□□□□ -0.27
RtcbQ99LF4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.36□□□□□ -0.27
RtcbQ99LF4 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC13.36□□□□□ -0.27
RtcbQ99LF4 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Gm19090-201ENSMUST00000218187 774 ntBASIC13.36□□□□□ -0.27
RtcbQ99LF4 AC174647.1-201ENSMUST00000227419 1271 ntBASIC13.36□□□□□ -0.27
RtcbQ99LF4 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC13.36□□□□□ -0.27
RtcbQ99LF4 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.36□□□□□ -0.27
RtcbQ99LF4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RtcbQ99LF4 Gm42521-201ENSMUST00000199190 2040 ntBASIC13.35□□□□□ -0.27
RtcbQ99LF4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm11929-201ENSMUST00000118175 945 ntBASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm15132-201ENSMUST00000118581 652 ntBASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm26208-201ENSMUST00000158677 124 ntBASIC13.35□□□□□ -0.27
RtcbQ99LF4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm26532-201ENSMUST00000180630 690 ntBASIC13.35□□□□□ -0.27
RtcbQ99LF4 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Thoc7-209ENSMUST00000225325 765 ntBASIC13.35□□□□□ -0.27
RtcbQ99LF4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RtcbQ99LF4 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms