Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Gm25766-201ENSMUST00000104101 131 ntBASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Gm12337-201ENSMUST00000119634 400 ntBASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Gm23771-201ENSMUST00000178702 110 ntBASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Gm18466-201ENSMUST00000209147 499 ntBASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Gm45310-201ENSMUST00000210436 275 ntBASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cchcr1Q8K2I2 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm13019-201ENSMUST00000120000 276 ntBASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm27910-201ENSMUST00000185004 107 ntBASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm9369-201ENSMUST00000196009 733 ntBASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cchcr1Q8K2I2 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm14892-201ENSMUST00000117636 267 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm5244-201ENSMUST00000164001 339 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm20426-201ENSMUST00000173657 440 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm43671-201ENSMUST00000200422 433 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms