Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm17192-201ENSMUST00000169031 511 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm19246-201ENSMUST00000173599 255 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps53Q8CCB4 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Vps53Q8CCB4 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.65□□□□□ -0.39
Vps53Q8CCB4 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.65□□□□□ -0.39
Vps53Q8CCB4 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm15528-201ENSMUST00000117821 864 ntBASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm25492-201ENSMUST00000157383 129 ntBASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm18776-201ENSMUST00000188833 654 ntBASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm8197-202ENSMUST00000193422 934 ntBASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm42779-201ENSMUST00000198807 406 ntBASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps53Q8CCB4 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Mir1905-201ENSMUST00000122779 82 ntBASIC12.63□□□□□ -0.39
Vps53Q8CCB4 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.63□□□□□ -0.39
Vps53Q8CCB4 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps53Q8CCB4 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms