Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx1Q8C8B0 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Alx1Q8C8B0 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Alx1Q8C8B0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx1Q8C8B0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx1Q8C8B0 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.59□□□□□ -0.39
Alx1Q8C8B0 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Alx1Q8C8B0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Alx1Q8C8B0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Alx1Q8C8B0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.58□□□□□ -0.39
Alx1Q8C8B0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm13600-201ENSMUST00000117949 744 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm25288-201ENSMUST00000122800 265 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm15620-201ENSMUST00000122949 270 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm16441-201ENSMUST00000138176 924 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm6038-201ENSMUST00000154310 948 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm27440-201ENSMUST00000184785 107 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm44647-201ENSMUST00000207402 428 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx1Q8C8B0 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm25880-201ENSMUST00000104331 132 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm28671-201ENSMUST00000187036 692 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms