Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm21638-201ENSMUST00000179473 836 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm26933-201ENSMUST00000182320 827 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm38075-201ENSMUST00000191979 920 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm43631-201ENSMUST00000202011 369 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm31520-201ENSMUST00000203048 733 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm18839-201ENSMUST00000204292 670 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm29759-201ENSMUST00000205860 327 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm20734-201ENSMUST00000216939 193 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 AC132384.8-201ENSMUST00000218152 1204 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm46191-201ENSMUST00000218899 433 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim35Q8C006 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim35Q8C006 AC122034.1-201ENSMUST00000227641 595 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm19114-201ENSMUST00000193972 1357 ntBASIC12.64□□□□□ -0.39
Trim35Q8C006 Ctf2-202ENSMUST00000206038 1825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim35Q8C006 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim35Q8C006 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim35Q8C006 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Mir686-201ENSMUST00000102174 109 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm22018-201ENSMUST00000104357 131 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm15094-201ENSMUST00000118394 1131 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm14584-201ENSMUST00000118956 637 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm14269-201ENSMUST00000120455 306 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm16379-201ENSMUST00000161469 348 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim35Q8C006 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm28700-201ENSMUST00000187614 579 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm8762-201ENSMUST00000193486 339 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm43461-201ENSMUST00000202351 996 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm4768-201ENSMUST00000206199 686 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 AC137902.2-201ENSMUST00000227989 576 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 AC133283.1-201ENSMUST00000228443 859 ntBASIC12.63□□□□□ -0.39
Trim35Q8C006 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim35Q8C006 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim35Q8C006 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms