Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm11380-201ENSMUST00000118067 560 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm11979-201ENSMUST00000119629 743 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm12453-201ENSMUST00000121981 331 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm20392-201ENSMUST00000173047 701 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm25677-201ENSMUST00000174983 72 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Mir8091-201ENSMUST00000183602 139 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm7880-201ENSMUST00000203748 871 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh8Q7TSK3 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm14274-201ENSMUST00000117182 615 ntBASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Mir6923-201ENSMUST00000184592 72 ntBASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm20781-201ENSMUST00000193154 693 ntBASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm19918-201ENSMUST00000194858 400 ntBASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm21736-201ENSMUST00000195399 693 ntBASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pcdh8Q7TSK3 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms