Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.98□□□□□ -0.65
Bdp1Q571C7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Gm24368-201ENSMUST00000175388 106 ntBASIC10.98□□□□□ -0.65
Bdp1Q571C7 Gm6695-201ENSMUST00000177264 1172 ntBASIC10.98□□□□□ -0.65
Bdp1Q571C7 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC10.98□□□□□ -0.65
Bdp1Q571C7 AC154643.1-201ENSMUST00000225643 625 ntBASIC10.98□□□□□ -0.65
Bdp1Q571C7 AC123533.3-201ENSMUST00000228056 454 ntBASIC10.98□□□□□ -0.65
Bdp1Q571C7 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Gm8420-201ENSMUST00000097103 598 ntBASIC10.98□□□□□ -0.65
Bdp1Q571C7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Gm7001-201ENSMUST00000219384 1465 ntBASIC10.98□□□□□ -0.65
Bdp1Q571C7 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.98□□□□□ -0.65
Bdp1Q571C7 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Bdp1Q571C7 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Rbm4-201ENSMUST00000164209 801 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 5031425E22Rik-203ENSMUST00000188328 828 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC10.97□□□□□ -0.65
Bdp1Q571C7 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Gm18749-201ENSMUST00000222410 692 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 AC161581.1-201ENSMUST00000228696 318 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Gm6457-201ENSMUST00000066378 815 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 AC153566.1-201ENSMUST00000216441 2057 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Spata33-207ENSMUST00000212760 4074 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 AC130671.3-201ENSMUST00000227393 1897 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Gm34780-201ENSMUST00000193896 949 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 Gm18857-201ENSMUST00000210421 901 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 CT025642.1-201ENSMUST00000224734 1219 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 AC124400.2-201ENSMUST00000224939 253 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 AC116390.1-201ENSMUST00000227975 670 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.97□□□□□ -0.65
Bdp1Q571C7 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Bdp1Q571C7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Bdp1Q571C7 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Bdp1Q571C7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Bdp1Q571C7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Bdp1Q571C7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Bdp1Q571C7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Bdp1Q571C7 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Bdp1Q571C7 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Bdp1Q571C7 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms