Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
Trim63Q38HM4 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Gdpd1-201ENSMUST00000020804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Gm45767-201ENSMUST00000212778 4561 ntBASIC8.83□□□□□ -1
Trim63Q38HM4 Luzp1-207ENSMUST00000170102 7526 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim63Q38HM4 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim63Q38HM4 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trim63Q38HM4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC8.83□□□□□ -1
Trim63Q38HM4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC8.83□□□□□ -1
Trim63Q38HM4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC8.83□□□□□ -1
Trim63Q38HM4 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim63Q38HM4 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC8.83□□□□□ -1
Trim63Q38HM4 Gm18473-201ENSMUST00000220543 868 ntBASIC8.83□□□□□ -1
Trim63Q38HM4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim63Q38HM4 Cass4-203ENSMUST00000109136 2702 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 AC132412.1-201ENSMUST00000204155 2724 ntBASIC8.83□□□□□ -1
Trim63Q38HM4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC8.83□□□□□ -1
Trim63Q38HM4 Gm37302-201ENSMUST00000192958 2998 ntBASIC8.83□□□□□ -1
Trim63Q38HM4 Mbnl1-203ENSMUST00000191747 4046 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Gm43910-201ENSMUST00000204561 3241 ntBASIC8.83□□□□□ -1
Trim63Q38HM4 Gm35725-201ENSMUST00000221862 2800 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim63Q38HM4 Lin7a-202ENSMUST00000105280 1634 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Gm43511-201ENSMUST00000197084 2297 ntBASIC8.83□□□□□ -1
Trim63Q38HM4 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Nkd1-202ENSMUST00000169179 4081 ntTSL 2 BASIC8.83□□□□□ -1
Trim63Q38HM4 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Stambp-201ENSMUST00000068054 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Gm15784-201ENSMUST00000120260 1462 ntBASIC8.83□□□□□ -1
Trim63Q38HM4 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim63Q38HM4 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm37464-201ENSMUST00000192431 2220 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm15455-201ENSMUST00000117459 2557 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 Olfr1221-202ENSMUST00000143255 2800 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Trim63Q38HM4 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Zmym3-203ENSMUST00000117901 5178 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm8228-201ENSMUST00000189949 2192 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Kif1b-202ENSMUST00000055647 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC8.82□□□□□ -1
Trim63Q38HM4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Trim63Q38HM4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm5419-201ENSMUST00000119301 527 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 Gm11941-201ENSMUST00000119904 610 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm5354-201ENSMUST00000182417 973 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm4768-201ENSMUST00000206199 686 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 Gm5904-201ENSMUST00000210286 865 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm39404-201ENSMUST00000216350 313 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm45930-201ENSMUST00000221330 292 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 AC116487.1-201ENSMUST00000227033 339 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC8.82□□□□□ -1
Trim63Q38HM4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms