Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm44062-201ENSMUST00000203312 4857 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm14017-201ENSMUST00000121934 386 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.22□□□□□ -0.77
Apoa1Q00623 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.22□□□□□ -0.77
Apoa1Q00623 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gm43307-201ENSMUST00000199465 2371 ntBASIC10.22□□□□□ -0.77
Apoa1Q00623 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Apoa1Q00623 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Apoa1Q00623 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm13126-201ENSMUST00000117079 3063 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm7666-201ENSMUST00000146631 819 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 Mir1938-201ENSMUST00000158746 100 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm37852-201ENSMUST00000193027 350 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm5468-202ENSMUST00000227851 682 ntBASIC10.21□□□□□ -0.77
Apoa1Q00623 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Apoa1Q00623 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.21□□□□□ -0.78
Apoa1Q00623 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Apoa1Q00623 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Apoa1Q00623 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Apoa1Q00623 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.21□□□□□ -0.78
Apoa1Q00623 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.21□□□□□ -0.78
Apoa1Q00623 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Apoa1Q00623 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Apoa1Q00623 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Apoa1Q00623 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms