Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm12247-201ENSMUST00000117585 670 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.05□□□□□ -0.96
SgcaP82350 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
SgcaP82350 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.05□□□□□ -0.96
SgcaP82350 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Mir7677-201ENSMUST00000184226 67 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm29615-201ENSMUST00000185371 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm28224-201ENSMUST00000186078 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm29001-201ENSMUST00000186177 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm28292-201ENSMUST00000186593 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm28101-201ENSMUST00000187608 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm29076-201ENSMUST00000187689 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm28302-201ENSMUST00000187931 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm28646-201ENSMUST00000188220 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm28205-201ENSMUST00000189177 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm29032-201ENSMUST00000189797 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm28695-201ENSMUST00000190300 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm37448-201ENSMUST00000192795 697 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.05□□□□□ -0.96
SgcaP82350 Gm38266-201ENSMUST00000194931 421 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm42859-201ENSMUST00000199572 193 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.05□□□□□ -0.96
SgcaP82350 Gm45224-201ENSMUST00000208203 414 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
SgcaP82350 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.05□□□□□ -0.96
SgcaP82350 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
SgcaP82350 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
SgcaP82350 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
SgcaP82350 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Btrc-206ENSMUST00000224102 3037 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.05□□□□□ -0.96
SgcaP82350 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SgcaP82350 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.04□□□□□ -0.96
SgcaP82350 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
SgcaP82350 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.04□□□□□ -0.96
SgcaP82350 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SgcaP82350 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
SgcaP82350 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
SgcaP82350 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.04□□□□□ -0.96
SgcaP82350 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.04□□□□□ -0.96
SgcaP82350 Gm8815-201ENSMUST00000173809 620 ntBASIC9.04□□□□□ -0.96
SgcaP82350 Gm5714-201ENSMUST00000197343 566 ntBASIC9.04□□□□□ -0.96
SgcaP82350 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.04□□□□□ -0.96
SgcaP82350 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.04□□□□□ -0.96
SgcaP82350 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Gm5996-201ENSMUST00000211110 718 ntBASIC9.04□□□□□ -0.96
SgcaP82350 Gm21769-201ENSMUST00000211922 111 ntBASIC9.04□□□□□ -0.96
SgcaP82350 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.04□□□□□ -0.96
SgcaP82350 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SgcaP82350 Gm25125-201ENSMUST00000083340 136 ntBASIC9.04□□□□□ -0.96
SgcaP82350 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
SgcaP82350 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SgcaP82350 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.04□□□□□ -0.96
SgcaP82350 Gm43615-201ENSMUST00000197465 1773 ntBASIC9.04□□□□□ -0.96
SgcaP82350 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SgcaP82350 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms