Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC7.64□□□□□ -1.19
Rpl39P62892 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm15566-201ENSMUST00000121130 590 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Gm6039-201ENSMUST00000121667 1250 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC7.64□□□□□ -1.19
Rpl39P62892 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC7.64□□□□□ -1.19
Rpl39P62892 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
Rpl39P62892 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC7.64□□□□□ -1.19
Rpl39P62892 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Rpl39P62892 AY702102-202ENSMUST00000194651 1173 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Gm38266-201ENSMUST00000194931 421 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Gm7003-201ENSMUST00000195089 312 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Gm38341-201ENSMUST00000195357 515 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Gm19091-201ENSMUST00000208120 978 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm9826-201ENSMUST00000029124 1299 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Rassf8-202ENSMUST00000058538 1131 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Rpl39P62892 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Rpl39P62892 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm37697-201ENSMUST00000195680 1844 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Rpl39P62892 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC7.64□□□□□ -1.19
Rpl39P62892 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Rpl39P62892 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC7.64□□□□□ -1.19
Rpl39P62892 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rpl39P62892 Gm16478-201ENSMUST00000208113 5084 ntBASIC7.63□□□□□ -1.19
Rpl39P62892 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Rpl39P62892 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
Rpl39P62892 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Rpl39P62892 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC7.63□□□□□ -1.19
Rpl39P62892 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Rpl39P62892 Gm38344-201ENSMUST00000195306 1353 ntBASIC7.63□□□□□ -1.19
Rpl39P62892 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Rpl39P62892 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Gfra2-203ENSMUST00000227697 1323 ntBASIC7.63□□□□□ -1.19
Rpl39P62892 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
Rpl39P62892 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Rpl39P62892 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Rpl39P62892 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Gm12715-201ENSMUST00000121430 1128 ntBASIC7.63□□□□□ -1.19
Rpl39P62892 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC7.63□□□□□ -1.19
Rpl39P62892 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC7.63□□□□□ -1.19
Rpl39P62892 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Gm24992-201ENSMUST00000157412 130 ntBASIC7.63□□□□□ -1.19
Rpl39P62892 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Rpl39P62892 Gm37284-201ENSMUST00000193607 539 ntBASIC7.63□□□□□ -1.19
Rpl39P62892 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC7.63□□□□□ -1.19
Rpl39P62892 Gm7118-201ENSMUST00000200167 1003 ntBASIC7.63□□□□□ -1.19
Rpl39P62892 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC7.63□□□□□ -1.19
Rpl39P62892 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC7.63□□□□□ -1.19
Rpl39P62892 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 AC117648.1-201ENSMUST00000219777 2510 ntBASIC7.63□□□□□ -1.19
Rpl39P62892 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC7.63□□□□□ -1.19
Rpl39P62892 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Rpl39P62892 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rpl39P62892 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms