Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm37852-201ENSMUST00000193027 350 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Gm36982-201ENSMUST00000193796 1128 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Gm37028-201ENSMUST00000194276 107 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Gm25053-202ENSMUST00000199731 132 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Gm10752-201ENSMUST00000218348 729 ntBASIC10.25□□□□□ -0.77
Nup43P59235 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC10.25□□□□□ -0.77
Nup43P59235 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nup43P59235 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nup43P59235 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Nup43P59235 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.24□□□□□ -0.77
Nup43P59235 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Gm25830-201ENSMUST00000158923 132 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Gm38210-201ENSMUST00000191944 809 ntBASIC10.24□□□□□ -0.77
Nup43P59235 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Gm6677-201ENSMUST00000195100 441 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.24□□□□□ -0.77
Nup43P59235 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.24□□□□□ -0.77
Nup43P59235 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Gm5178-201ENSMUST00000219380 898 ntBASIC10.24□□□□□ -0.77
Nup43P59235 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Nup43P59235 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.24□□□□□ -0.77
Nup43P59235 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup43P59235 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nup43P59235 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Nup43P59235 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms