Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.88□□□□□ -0.35
Rfx1P48377 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx1P48377 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx1P48377 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rfx1P48377 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.88□□□□□ -0.35
Rfx1P48377 Gm15615-201ENSMUST00000118876 198 ntBASIC12.88□□□□□ -0.35
Rfx1P48377 Gm8302-201ENSMUST00000119217 852 ntBASIC12.88□□□□□ -0.35
Rfx1P48377 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Rfx1P48377 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.88□□□□□ -0.35
Rfx1P48377 Gm11836-201ENSMUST00000121022 441 ntBASIC12.88□□□□□ -0.35
Rfx1P48377 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.88□□□□□ -0.35
Rfx1P48377 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.88□□□□□ -0.35
Rfx1P48377 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.88□□□□□ -0.35
Rfx1P48377 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.88□□□□□ -0.35
Rfx1P48377 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.88□□□□□ -0.35
Rfx1P48377 Gm37835-201ENSMUST00000193305 361 ntBASIC12.88□□□□□ -0.35
Rfx1P48377 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.88□□□□□ -0.35
Rfx1P48377 Gm19091-201ENSMUST00000208120 978 ntBASIC12.88□□□□□ -0.35
Rfx1P48377 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.88□□□□□ -0.35
Rfx1P48377 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.88□□□□□ -0.35
Rfx1P48377 AC155266.1-201ENSMUST00000220762 904 ntBASIC12.88□□□□□ -0.35
Rfx1P48377 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rfx1P48377 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx1P48377 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Rfx1P48377 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Rfx1P48377 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx1P48377 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Rfx1P48377 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx1P48377 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx1P48377 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rfx1P48377 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx1P48377 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.88□□□□□ -0.35
Rfx1P48377 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rfx1P48377 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rfx1P48377 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rfx1P48377 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.87□□□□□ -0.35
Rfx1P48377 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Rfx1P48377 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.87□□□□□ -0.35
Rfx1P48377 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rfx1P48377 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.87□□□□□ -0.35
Rfx1P48377 Gm16219-201ENSMUST00000120096 274 ntBASIC12.87□□□□□ -0.35
Rfx1P48377 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.87□□□□□ -0.35
Rfx1P48377 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.87□□□□□ -0.35
Rfx1P48377 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.87□□□□□ -0.35
Rfx1P48377 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.87□□□□□ -0.35
Rfx1P48377 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.87□□□□□ -0.35
Rfx1P48377 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rfx1P48377 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.87□□□□□ -0.35
Rfx1P48377 Gm5865-201ENSMUST00000198713 637 ntBASIC12.87□□□□□ -0.35
Rfx1P48377 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Rfx1P48377 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.87□□□□□ -0.35
Rfx1P48377 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.87□□□□□ -0.35
Rfx1P48377 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rfx1P48377 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.87□□□□□ -0.35
Rfx1P48377 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC12.87□□□□□ -0.35
Rfx1P48377 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Rfx1P48377 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rfx1P48377 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx1P48377 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx1P48377 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.86□□□□□ -0.35
Rfx1P48377 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx1P48377 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx1P48377 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx1P48377 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx1P48377 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx1P48377 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.86□□□□□ -0.35
Rfx1P48377 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx1P48377 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx1P48377 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rfx1P48377 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.86□□□□□ -0.35
Rfx1P48377 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx1P48377 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Rfx1P48377 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx1P48377 Gm23200-201ENSMUST00000104379 132 ntBASIC12.86□□□□□ -0.35
Rfx1P48377 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms