Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-6P43688 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-6P43688 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.29□□□□□ -0.76
Nkx2-6P43688 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-6P43688 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-6P43688 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nkx2-6P43688 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-6P43688 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-6P43688 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.29□□□□□ -0.76
Nkx2-6P43688 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-6P43688 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-6P43688 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-6P43688 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-6P43688 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.28□□□□□ -0.76
Nkx2-6P43688 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.28□□□□□ -0.76
Nkx2-6P43688 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gm24074-201ENSMUST00000158178 260 ntBASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gm27440-201ENSMUST00000184785 107 ntBASIC10.28□□□□□ -0.76
Nkx2-6P43688 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gm5302-201ENSMUST00000202130 796 ntBASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.28□□□□□ -0.76
Nkx2-6P43688 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.28□□□□□ -0.76
Nkx2-6P43688 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.28□□□□□ -0.76
Nkx2-6P43688 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-6P43688 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-6P43688 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-6P43688 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.27□□□□□ -0.76
Nkx2-6P43688 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-6P43688 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Nkx2-6P43688 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.27□□□□□ -0.76
Nkx2-6P43688 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-6P43688 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-6P43688 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
Nkx2-6P43688 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.27□□□□□ -0.77
Nkx2-6P43688 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.27□□□□□ -0.77
Nkx2-6P43688 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.27□□□□□ -0.77
Nkx2-6P43688 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.27□□□□□ -0.77
Nkx2-6P43688 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms