Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pbx1P41778 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pbx1P41778 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pbx1P41778 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pbx1P41778 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pbx1P41778 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pbx1P41778 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pbx1P41778 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pbx1P41778 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC11.6□□□□□ -0.55
Pbx1P41778 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pbx1P41778 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pbx1P41778 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Pbx1P41778 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pbx1P41778 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pbx1P41778 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Pbx1P41778 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pbx1P41778 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pbx1P41778 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pbx1P41778 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pbx1P41778 AC125351.1-201ENSMUST00000221438 2223 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pbx1P41778 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pbx1P41778 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pbx1P41778 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Gm13019-201ENSMUST00000120000 276 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.59□□□□□ -0.55
Pbx1P41778 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.59□□□□□ -0.55
Pbx1P41778 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 Mir7070-201ENSMUST00000183657 86 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.59□□□□□ -0.55
Pbx1P41778 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.59□□□□□ -0.55
Pbx1P41778 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Gm37299-201ENSMUST00000193951 826 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 Gm3786-201ENSMUST00000202659 378 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 Gm44420-201ENSMUST00000203669 490 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 Gm39288-201ENSMUST00000210554 446 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.59□□□□□ -0.55
Pbx1P41778 Gm9102-201ENSMUST00000219250 465 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 Gm5189-201ENSMUST00000221796 261 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.59□□□□□ -0.55
Pbx1P41778 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.59□□□□□ -0.55
Pbx1P41778 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pbx1P41778 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.59□□□□□ -0.55
Pbx1P41778 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pbx1P41778 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pbx1P41778 Gm44570-201ENSMUST00000207526 3698 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Pbx1P41778 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pbx1P41778 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pbx1P41778 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.58□□□□□ -0.56
Pbx1P41778 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.58□□□□□ -0.56
Pbx1P41778 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pbx1P41778 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pbx1P41778 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pbx1P41778 Gm38199-201ENSMUST00000192013 3277 ntBASIC11.58□□□□□ -0.56
Pbx1P41778 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC11.58□□□□□ -0.56
Pbx1P41778 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pbx1P41778 Mbnl1-203ENSMUST00000191747 4046 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pbx1P41778 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.58□□□□□ -0.56
Pbx1P41778 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pbx1P41778 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pbx1P41778 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pbx1P41778 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pbx1P41778 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.58□□□□□ -0.56
Pbx1P41778 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Pbx1P41778 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.58□□□□□ -0.56
Pbx1P41778 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.58□□□□□ -0.56
Pbx1P41778 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms