Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cxcl12P40224 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cxcl12P40224 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cxcl12P40224 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.14□□□□□ -0.63
Cxcl12P40224 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm12377-201ENSMUST00000118656 252 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm8809-201ENSMUST00000119367 743 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm17107-201ENSMUST00000170983 553 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm28391-201ENSMUST00000185202 379 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Tspy-ps-203ENSMUST00000186546 989 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm29528-201ENSMUST00000186699 379 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm29526-201ENSMUST00000187217 379 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm28179-201ENSMUST00000188365 613 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl12P40224 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm18299-201ENSMUST00000192026 636 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm37819-201ENSMUST00000194626 1065 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm25483-201ENSMUST00000083224 227 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl12P40224 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm38220-201ENSMUST00000195774 1447 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl12P40224 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.14□□□□□ -0.63
Cxcl12P40224 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.14□□□□□ -0.63
Cxcl12P40224 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl12P40224 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl12P40224 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl12P40224 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 AC116596.1-201ENSMUST00000228112 1762 ntBASIC11.13□□□□□ -0.63
Cxcl12P40224 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Gm14538-201ENSMUST00000122019 1327 ntBASIC11.13□□□□□ -0.63
Cxcl12P40224 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Gm5174-201ENSMUST00000171131 1423 ntBASIC11.13□□□□□ -0.63
Cxcl12P40224 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Gm25561-201ENSMUST00000104607 125 ntBASIC11.13□□□□□ -0.63
Cxcl12P40224 Gm14650-201ENSMUST00000120400 889 ntBASIC11.13□□□□□ -0.63
Cxcl12P40224 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC11.13□□□□□ -0.63
Cxcl12P40224 Gm15727-201ENSMUST00000122416 437 ntBASIC11.13□□□□□ -0.63
Cxcl12P40224 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Gm5191-201ENSMUST00000222882 1236 ntBASIC11.13□□□□□ -0.63
Cxcl12P40224 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cxcl12P40224 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cxcl12P40224 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.13□□□□□ -0.63
Cxcl12P40224 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Gm13456-201ENSMUST00000118928 1365 ntBASIC11.13□□□□□ -0.63
Cxcl12P40224 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl12P40224 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms