Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm43820-201ENSMUST00000199414 3346 ntBASIC8.78□□□□□ -1
Cdx1P18111 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Cdx1P18111 Mir680-2-201ENSMUST00000102163 110 ntBASIC8.78□□□□□ -1
Cdx1P18111 Gm23251-201ENSMUST00000103773 110 ntBASIC8.78□□□□□ -1
Cdx1P18111 Gm23596-201ENSMUST00000104304 132 ntBASIC8.78□□□□□ -1
Cdx1P18111 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC8.78□□□□□ -1
Cdx1P18111 Gm6506-201ENSMUST00000119775 1136 ntBASIC8.78□□□□□ -1
Cdx1P18111 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC8.78□□□□□ -1
Cdx1P18111 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC8.78□□□□□ -1
Cdx1P18111 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC8.78□□□□□ -1
Cdx1P18111 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC8.78□□□□□ -1
Cdx1P18111 Gm9555-201ENSMUST00000200908 583 ntBASIC8.78□□□□□ -1
Cdx1P18111 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 AC122876.1-201ENSMUST00000217619 825 ntBASIC8.78□□□□□ -1
Cdx1P18111 Olfr1347-205ENSMUST00000220413 964 ntBASIC8.78□□□□□ -1
Cdx1P18111 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cdx1P18111 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC8.78□□□□□ -1
Cdx1P18111 Gm5455-201ENSMUST00000058710 715 ntBASIC8.78□□□□□ -1
Cdx1P18111 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cdx1P18111 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC8.78□□□□□ -1
Cdx1P18111 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cdx1P18111 Gm10179-201ENSMUST00000086233 688 ntBASIC8.78□□□□□ -1
Cdx1P18111 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cdx1P18111 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cdx1P18111 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Gm38199-201ENSMUST00000192013 3277 ntBASIC8.78□□□□□ -1
Cdx1P18111 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC8.78□□□□□ -1
Cdx1P18111 Gm42879-201ENSMUST00000198656 2214 ntBASIC8.78□□□□□ -1
Cdx1P18111 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Gm45170-201ENSMUST00000206746 1671 ntBASIC8.78□□□□□ -1
Cdx1P18111 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Gm5525-201ENSMUST00000190438 1312 ntBASIC8.78□□□□□ -1
Cdx1P18111 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Cdx1P18111 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
Cdx1P18111 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC8.77□□□□□ -1
Cdx1P18111 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Cdx1P18111 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Cdx1P18111 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Cdx1P18111 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC8.77□□□□□ -1
Cdx1P18111 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cdx1P18111 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Mov10-207ENSMUST00000168015 3460 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC8.77□□□□□ -1.01
Cdx1P18111 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
Cdx1P18111 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm37367-201ENSMUST00000191771 2602 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm13497-201ENSMUST00000139497 2038 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC8.77□□□□□ -1.01
Cdx1P18111 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm7851-201ENSMUST00000117574 323 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm15782-201ENSMUST00000121073 445 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC8.77□□□□□ -1.01
Cdx1P18111 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm19459-201ENSMUST00000176240 835 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm8343-201ENSMUST00000182705 994 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Cdx1P18111 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Gm43830-201ENSMUST00000198760 1067 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Cdx1P18111 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm44545-201ENSMUST00000208262 746 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC8.77□□□□□ -1.01
Cdx1P18111 Gm4157-201ENSMUST00000211647 679 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 CT571245.2-201ENSMUST00000218421 305 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Gm1821-202ENSMUST00000227415 750 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 AC159103.1-201ENSMUST00000228325 429 ntBASIC8.77□□□□□ -1.01
Cdx1P18111 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Cdx1P18111 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx1P18111 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms