Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.1□□□□□ -0.63
CopeO89079 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
CopeO89079 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Gm12337-201ENSMUST00000119634 400 ntBASIC11.1□□□□□ -0.63
CopeO89079 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.1□□□□□ -0.63
CopeO89079 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.1□□□□□ -0.63
CopeO89079 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CopeO89079 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CopeO89079 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CopeO89079 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CopeO89079 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC11.1□□□□□ -0.63
CopeO89079 Gm30946-201ENSMUST00000198288 724 ntBASIC11.1□□□□□ -0.63
CopeO89079 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.1□□□□□ -0.63
CopeO89079 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CopeO89079 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CopeO89079 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.1□□□□□ -0.63
CopeO89079 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
CopeO89079 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.1□□□□□ -0.63
CopeO89079 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CopeO89079 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CopeO89079 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.09□□□□□ -0.63
CopeO89079 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CopeO89079 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.09□□□□□ -0.63
CopeO89079 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.09□□□□□ -0.63
CopeO89079 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CopeO89079 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC11.09□□□□□ -0.63
CopeO89079 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.09□□□□□ -0.63
CopeO89079 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CopeO89079 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Gm23200-201ENSMUST00000104379 132 ntBASIC11.09□□□□□ -0.63
CopeO89079 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.09□□□□□ -0.63
CopeO89079 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC11.09□□□□□ -0.63
CopeO89079 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.09□□□□□ -0.63
CopeO89079 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Gm22144-201ENSMUST00000157402 102 ntBASIC11.09□□□□□ -0.63
CopeO89079 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Gm40414-201ENSMUST00000197608 481 ntBASIC11.09□□□□□ -0.63
CopeO89079 Gm7848-201ENSMUST00000210739 718 ntBASIC11.09□□□□□ -0.63
CopeO89079 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.09□□□□□ -0.63
CopeO89079 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.09□□□□□ -0.63
CopeO89079 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.09□□□□□ -0.63
CopeO89079 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.09□□□□□ -0.63
CopeO89079 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CopeO89079 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.09□□□□□ -0.63
CopeO89079 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CopeO89079 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CopeO89079 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.09□□□□□ -0.63
CopeO89079 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.09□□□□□ -0.63
CopeO89079 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CopeO89079 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.09□□□□□ -0.63
CopeO89079 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CopeO89079 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.08□□□□□ -0.63
CopeO89079 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC11.08□□□□□ -0.64
CopeO89079 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms