Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn11aQ9R053 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.68□□□□□ -0.38
Scn11aQ9R053 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Gm15604-201ENSMUST00000118350 1456 ntBASIC12.68□□□□□ -0.38
Scn11aQ9R053 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn11aQ9R053 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC12.68□□□□□ -0.38
Scn11aQ9R053 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Gm26356-201ENSMUST00000158217 283 ntBASIC12.68□□□□□ -0.38
Scn11aQ9R053 Mir6360-201ENSMUST00000184278 126 ntBASIC12.68□□□□□ -0.38
Scn11aQ9R053 Gm38135-201ENSMUST00000195068 502 ntBASIC12.68□□□□□ -0.38
Scn11aQ9R053 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Gm18124-201ENSMUST00000210695 706 ntBASIC12.68□□□□□ -0.38
Scn11aQ9R053 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC12.68□□□□□ -0.38
Scn11aQ9R053 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn11aQ9R053 AC157650.1-201ENSMUST00000224582 610 ntBASIC12.68□□□□□ -0.38
Scn11aQ9R053 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn11aQ9R053 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Gm20091-201ENSMUST00000179683 189 ntBASIC12.67□□□□□ -0.38
Scn11aQ9R053 Gm18443-201ENSMUST00000185358 556 ntBASIC12.67□□□□□ -0.38
Scn11aQ9R053 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Gm37390-201ENSMUST00000192452 872 ntBASIC12.67□□□□□ -0.38
Scn11aQ9R053 Gm45893-201ENSMUST00000211899 247 ntBASIC12.67□□□□□ -0.38
Scn11aQ9R053 Gm19228-201ENSMUST00000214030 717 ntBASIC12.67□□□□□ -0.38
Scn11aQ9R053 AC154431.1-201ENSMUST00000224910 880 ntBASIC12.67□□□□□ -0.38
Scn11aQ9R053 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Gm8730-201ENSMUST00000076373 954 ntBASIC12.67□□□□□ -0.38
Scn11aQ9R053 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 A1cf-204ENSMUST00000224564 1432 ntBASIC12.67□□□□□ -0.38
Scn11aQ9R053 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn11aQ9R053 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm37009-201ENSMUST00000193297 361 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm8625-201ENSMUST00000194185 1077 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm19090-201ENSMUST00000218187 774 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn11aQ9R053 Gm22751-201ENSMUST00000102077 109 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 Mir692-3-201ENSMUST00000102079 109 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 Mir692-2-201ENSMUST00000102081 109 ntBASIC12.66□□□□□ -0.38
Scn11aQ9R053 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms