Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.43□□□□□ -0.58
Usp11Q99K46 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.43□□□□□ -0.58
Usp11Q99K46 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.42□□□□□ -0.58
Usp11Q99K46 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.42□□□□□ -0.58
Usp11Q99K46 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.42□□□□□ -0.58
Usp11Q99K46 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gm12516-201ENSMUST00000120819 385 ntBASIC11.42□□□□□ -0.58
Usp11Q99K46 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.42□□□□□ -0.58
Usp11Q99K46 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gm44551-201ENSMUST00000208804 171 ntBASIC11.42□□□□□ -0.58
Usp11Q99K46 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.42□□□□□ -0.58
Usp11Q99K46 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Usp11Q99K46 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp11Q99K46 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Gm25766-201ENSMUST00000104101 131 ntBASIC11.41□□□□□ -0.58
Usp11Q99K46 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.41□□□□□ -0.58
Usp11Q99K46 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.41□□□□□ -0.58
Usp11Q99K46 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.41□□□□□ -0.58
Usp11Q99K46 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Gm17877-201ENSMUST00000192578 814 ntBASIC11.41□□□□□ -0.58
Usp11Q99K46 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.41□□□□□ -0.58
Usp11Q99K46 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.41□□□□□ -0.58
Usp11Q99K46 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.41□□□□□ -0.58
Usp11Q99K46 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms