Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 AC117648.1-201ENSMUST00000219777 2510 ntBASIC9.89□□□□□ -0.83
Lims1Q99JW4 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm27438-201ENSMUST00000183480 110 ntBASIC9.89□□□□□ -0.83
Lims1Q99JW4 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm37826-201ENSMUST00000195329 322 ntBASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm9555-201ENSMUST00000200908 583 ntBASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.89□□□□□ -0.83
Lims1Q99JW4 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.89□□□□□ -0.83
Lims1Q99JW4 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 AC124581.2-201ENSMUST00000225459 282 ntBASIC9.89□□□□□ -0.83
Lims1Q99JW4 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.89□□□□□ -0.83
Lims1Q99JW4 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lims1Q99JW4 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm4726-201ENSMUST00000135604 736 ntBASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm6019-201ENSMUST00000148369 736 ntBASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm23958-201ENSMUST00000157207 105 ntBASIC9.88□□□□□ -0.83
Lims1Q99JW4 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm8197-202ENSMUST00000193422 934 ntBASIC9.88□□□□□ -0.83
Lims1Q99JW4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm43377-201ENSMUST00000201640 455 ntBASIC9.88□□□□□ -0.83
Lims1Q99JW4 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm5051-201ENSMUST00000204085 485 ntBASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm45219-201ENSMUST00000205602 465 ntBASIC9.88□□□□□ -0.83
Lims1Q99JW4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Lims1Q99JW4 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms