Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Gm15625-201ENSMUST00000117617 1093 ntBASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Gm5555-201ENSMUST00000120352 1111 ntBASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Gm16441-201ENSMUST00000138176 924 ntBASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Gm6038-201ENSMUST00000154310 948 ntBASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Gm43244-201ENSMUST00000196994 1285 ntBASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Gm45677-201ENSMUST00000209975 1341 ntBASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11□□□□□ -0.65
Sh3rf2Q8BZT2 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm18010-201ENSMUST00000203553 202 ntBASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm10580-201ENSMUST00000097985 396 ntBASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm10582-201ENSMUST00000097987 396 ntBASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gm10583-201ENSMUST00000097988 396 ntBASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sh3rf2Q8BZT2 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms