Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Usp54Q8BL06 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC15.15■□□□□ 0.02
Usp54Q8BL06 Spin3-ps-201ENSMUST00000192825 770 ntBASIC15.15■□□□□ 0.02
Usp54Q8BL06 Gm38004-201ENSMUST00000192972 357 ntBASIC15.15■□□□□ 0.02
Usp54Q8BL06 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC15.15■□□□□ 0.02
Usp54Q8BL06 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC15.15■□□□□ 0.02
Usp54Q8BL06 Gm8960-201ENSMUST00000219787 788 ntBASIC15.15■□□□□ 0.02
Usp54Q8BL06 Gm5189-201ENSMUST00000221796 261 ntBASIC15.15■□□□□ 0.02
Usp54Q8BL06 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC15.15■□□□□ 0.02
Usp54Q8BL06 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp54Q8BL06 Gm4883-201ENSMUST00000085702 528 ntBASIC15.15■□□□□ 0.02
Usp54Q8BL06 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Usp54Q8BL06 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Gm25561-201ENSMUST00000104607 125 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 Gm15264-201ENSMUST00000118050 502 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 Gm22763-201ENSMUST00000158374 107 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Gm6967-201ENSMUST00000182599 1007 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 Gm38145-201ENSMUST00000192319 693 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 Gm9273-201ENSMUST00000200606 715 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 AC164614.1-201ENSMUST00000216038 397 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 AC156274.1-201ENSMUST00000219193 634 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Gm7190-201ENSMUST00000118669 1452 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp54Q8BL06 Gm7790-201ENSMUST00000118716 1310 ntBASIC15.14■□□□□ 0.01
Usp54Q8BL06 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.13■□□□□ 0.01
Usp54Q8BL06 AC160410.1-201ENSMUST00000219298 1972 ntBASIC15.13■□□□□ 0.01
Usp54Q8BL06 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Usp54Q8BL06 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
Usp54Q8BL06 AC132881.1-201ENSMUST00000223780 1062 ntBASIC15.13■□□□□ 0.01
Usp54Q8BL06 CT009550.1-201ENSMUST00000225750 864 ntBASIC15.13■□□□□ 0.01
Usp54Q8BL06 Gm42731-201ENSMUST00000201839 1641 ntBASIC15.13■□□□□ 0.01
Usp54Q8BL06 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 AC147366.2-201ENSMUST00000226859 2038 ntBASIC15.13■□□□□ 0.01
Usp54Q8BL06 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp54Q8BL06 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Gm45110-201ENSMUST00000205704 1402 ntBASIC15.12■□□□□ 0.01
Usp54Q8BL06 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Fut8-202ENSMUST00000171770 2765 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Hyal2-206ENSMUST00000195681 2968 ntBASIC15.12■□□□□ 0.01
Usp54Q8BL06 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp54Q8BL06 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp54Q8BL06 Gm23916-201ENSMUST00000158484 399 ntBASIC15.12■□□□□ 0.01
Usp54Q8BL06 Gm6773-201ENSMUST00000182377 878 ntBASIC15.12■□□□□ 0.01
Usp54Q8BL06 Gm2021-201ENSMUST00000190623 464 ntBASIC15.12■□□□□ 0.01
Usp54Q8BL06 Gm5845-201ENSMUST00000195812 796 ntBASIC15.12■□□□□ 0.01
Usp54Q8BL06 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp54Q8BL06 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC15.12■□□□□ 0.01
Usp54Q8BL06 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp54Q8BL06 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms