Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Alox8-201ENSMUST00000021262 3226 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 AC117648.1-201ENSMUST00000219777 2510 ntBASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Mmel1-201ENSMUST00000079269 2934 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm9866-205ENSMUST00000220998 1973 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Nupl1-201ENSMUST00000225805 3602 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm26047-201ENSMUST00000157308 113 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm25700-201ENSMUST00000177693 110 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm27627-201ENSMUST00000183644 150 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm19891-201ENSMUST00000189771 303 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm26047-202ENSMUST00000198840 115 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm43758-201ENSMUST00000199500 367 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm17812-201ENSMUST00000204935 318 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm9797-202ENSMUST00000218003 294 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 CT009754.4-201ENSMUST00000221430 565 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Rffl-204ENSMUST00000093975 3575 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.23□□□□□ -0.77
Rnf220Q6PDX6 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Olfr1395-203ENSMUST00000214195 2984 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Gm11509-201ENSMUST00000117358 325 ntBASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 Gm3329-201ENSMUST00000159873 556 ntBASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf220Q6PDX6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms