Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm13019-201ENSMUST00000120000 276 ntBASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm15554-201ENSMUST00000120406 913 ntBASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm13182-201ENSMUST00000122241 312 ntBASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm8162-201ENSMUST00000213951 665 ntBASIC12.11□□□□□ -0.47
Usp49Q6P9L4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Gm43372-201ENSMUST00000202662 3016 ntBASIC12.11□□□□□ -0.47
Usp49Q6P9L4 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm42833-201ENSMUST00000196019 2124 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm11411-201ENSMUST00000117951 719 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm9673-201ENSMUST00000119287 781 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm10169-201ENSMUST00000121822 348 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm16030-201ENSMUST00000159098 603 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm28324-201ENSMUST00000187913 264 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm34023-201ENSMUST00000195539 217 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm43097-201ENSMUST00000196867 151 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Usp49Q6P9L4 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms