Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm42974-201ENSMUST00000199556 2654 ntBASIC8.28□□□□□ -1.08
NipblQ6KCD5 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
NipblQ6KCD5 4933427I22Rik-202ENSMUST00000153921 1378 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm12047-201ENSMUST00000117561 944 ntBASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm8661-201ENSMUST00000118688 992 ntBASIC8.28□□□□□ -1.08
NipblQ6KCD5 n-R5s154-201ENSMUST00000122513 108 ntBASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm23563-201ENSMUST00000174900 251 ntBASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm5873-201ENSMUST00000177157 1066 ntBASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm43097-201ENSMUST00000196867 151 ntBASIC8.28□□□□□ -1.08
NipblQ6KCD5 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC8.28□□□□□ -1.08
NipblQ6KCD5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NipblQ6KCD5 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Gm13758-201ENSMUST00000118699 743 ntBASIC8.27□□□□□ -1.08
NipblQ6KCD5 Gm23916-201ENSMUST00000158484 399 ntBASIC8.27□□□□□ -1.08
NipblQ6KCD5 Gm9574-201ENSMUST00000173127 845 ntBASIC8.27□□□□□ -1.08
NipblQ6KCD5 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Gm43674-201ENSMUST00000196313 791 ntBASIC8.27□□□□□ -1.08
NipblQ6KCD5 Gm11149-202ENSMUST00000215070 1169 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 AC164429.1-201ENSMUST00000224210 518 ntBASIC8.27□□□□□ -1.08
NipblQ6KCD5 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC8.27□□□□□ -1.08
NipblQ6KCD5 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
NipblQ6KCD5 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Gm5510-201ENSMUST00000117826 486 ntBASIC8.27□□□□□ -1.09
NipblQ6KCD5 Gm23220-201ENSMUST00000158115 137 ntBASIC8.27□□□□□ -1.09
NipblQ6KCD5 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Mir6940-201ENSMUST00000183447 70 ntBASIC8.27□□□□□ -1.09
NipblQ6KCD5 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC8.27□□□□□ -1.09
NipblQ6KCD5 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Gm25514-201ENSMUST00000083860 135 ntBASIC8.27□□□□□ -1.09
NipblQ6KCD5 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Gm12716-201ENSMUST00000120606 1354 ntBASIC8.27□□□□□ -1.09
NipblQ6KCD5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NipblQ6KCD5 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms