Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ift88Q61371 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Ift88Q61371 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ift88Q61371 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.94□□□□□ -0.5
Ift88Q61371 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.94□□□□□ -0.5
Ift88Q61371 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.94□□□□□ -0.5
Ift88Q61371 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.94□□□□□ -0.5
Ift88Q61371 Gm17831-201ENSMUST00000205579 900 ntBASIC11.94□□□□□ -0.5
Ift88Q61371 Gm45310-201ENSMUST00000210436 275 ntBASIC11.94□□□□□ -0.5
Ift88Q61371 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.94□□□□□ -0.5
Ift88Q61371 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.94□□□□□ -0.5
Ift88Q61371 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ift88Q61371 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.94□□□□□ -0.5
Ift88Q61371 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.94□□□□□ -0.5
Ift88Q61371 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ift88Q61371 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Ift88Q61371 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ift88Q61371 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ift88Q61371 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.93□□□□□ -0.5
Ift88Q61371 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.93□□□□□ -0.5
Ift88Q61371 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ift88Q61371 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ift88Q61371 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Ift88Q61371 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.93□□□□□ -0.5
Ift88Q61371 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.93□□□□□ -0.5
Ift88Q61371 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Gm25076-201ENSMUST00000104098 132 ntBASIC11.93□□□□□ -0.5
Ift88Q61371 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.93□□□□□ -0.5
Ift88Q61371 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.93□□□□□ -0.5
Ift88Q61371 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Gm44155-201ENSMUST00000203923 412 ntBASIC11.93□□□□□ -0.5
Ift88Q61371 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.93□□□□□ -0.5
Ift88Q61371 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.93□□□□□ -0.5
Ift88Q61371 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.93□□□□□ -0.5
Ift88Q61371 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Ift88Q61371 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.93□□□□□ -0.5
Ift88Q61371 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.93□□□□□ -0.5
Ift88Q61371 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
Ift88Q61371 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.93□□□□□ -0.5
Ift88Q61371 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ift88Q61371 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ift88Q61371 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.92□□□□□ -0.5
Ift88Q61371 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Ift88Q61371 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ift88Q61371 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ift88Q61371 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.92□□□□□ -0.5
Ift88Q61371 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.92□□□□□ -0.5
Ift88Q61371 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ift88Q61371 Gm12663-201ENSMUST00000118481 958 ntBASIC11.92□□□□□ -0.5
Ift88Q61371 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ift88Q61371 Gm15573-201ENSMUST00000119487 540 ntBASIC11.92□□□□□ -0.5
Ift88Q61371 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.92□□□□□ -0.5
Ift88Q61371 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.92□□□□□ -0.5
Ift88Q61371 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms