Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm6677-201ENSMUST00000195100 441 ntBASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Gm3889-201ENSMUST00000212467 612 ntBASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 AC161172.1-201ENSMUST00000227801 486 ntBASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Gm43102-201ENSMUST00000201004 2324 ntBASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 AC154640.1-203ENSMUST00000228316 1618 ntBASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Gm44664-201ENSMUST00000206841 1786 ntBASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Gm12377-201ENSMUST00000118656 252 ntBASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Gm2021-201ENSMUST00000190623 464 ntBASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 AC156274.1-201ENSMUST00000219193 634 ntBASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 CT025538.1-201ENSMUST00000223638 369 ntBASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 AC161374.2-201ENSMUST00000223662 596 ntBASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Gm5174-201ENSMUST00000171131 1423 ntBASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b2Q3UJB0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Gm14592-201ENSMUST00000117201 560 ntBASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Gm8809-201ENSMUST00000119367 743 ntBASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Gm6425-201ENSMUST00000136332 790 ntBASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 CT025679.1-201ENSMUST00000227106 449 ntBASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Gm4865-201ENSMUST00000196284 1309 ntBASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Gm38227-201ENSMUST00000193036 1602 ntBASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b2Q3UJB0 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b2Q3UJB0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b2Q3UJB0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b2Q3UJB0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b2Q3UJB0 Gm43622-201ENSMUST00000200140 2019 ntBASIC14.02□□□□□ -0.16
Sf3b2Q3UJB0 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms