Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm18289-201ENSMUST00000203356 2989 ntBASIC9.84□□□□□ -0.83
Ccbe1Q3MI99 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ccbe1Q3MI99 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm29326-201ENSMUST00000185541 2451 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Sfi1-201ENSMUST00000066391 3898 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 AC151836.1-201ENSMUST00000228730 1637 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm11801-201ENSMUST00000117807 746 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm7809-201ENSMUST00000153199 742 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm25661-201ENSMUST00000157704 296 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm28937-201ENSMUST00000185413 695 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm29400-201ENSMUST00000187208 695 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm28662-201ENSMUST00000188446 695 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm28251-201ENSMUST00000188835 695 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm37318-201ENSMUST00000194325 695 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm38017-201ENSMUST00000194768 695 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm37287-201ENSMUST00000195449 695 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm37793-201ENSMUST00000195548 695 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm44420-201ENSMUST00000203669 490 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 A3galt2-201ENSMUST00000030585 3390 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Gm42879-201ENSMUST00000198656 2214 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 AC130671.3-201ENSMUST00000227393 1897 ntBASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Ccbe1Q3MI99 4933427I04Rik-201ENSMUST00000097896 2183 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Acot12-201ENSMUST00000022120 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Gm35808-201ENSMUST00000204769 2602 ntBASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Gm36638-202ENSMUST00000192073 2169 ntBASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Gm44189-201ENSMUST00000204387 3083 ntBASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccbe1Q3MI99 AC123534.1-202ENSMUST00000224256 1837 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms