Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm6441-201ENSMUST00000120983 696 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm16441-201ENSMUST00000138176 924 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm6038-201ENSMUST00000154310 948 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm6291-201ENSMUST00000179994 309 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Wbp1-209ENSMUST00000205023 716 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC11.75□□□□□ -0.53
Col9a2Q07643 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm32914-201ENSMUST00000203815 2228 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm13688-201ENSMUST00000121557 608 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Mir432-201ENSMUST00000157230 75 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm26313-201ENSMUST00000157770 308 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm5865-201ENSMUST00000198713 637 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm3926-201ENSMUST00000223378 1123 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 AC157650.1-201ENSMUST00000224582 610 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.74□□□□□ -0.53
Col9a2Q07643 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.74□□□□□ -0.53
Col9a2Q07643 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a2Q07643 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.73□□□□□ -0.53
Col9a2Q07643 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.73□□□□□ -0.53
Col9a2Q07643 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col9a2Q07643 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col9a2Q07643 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col9a2Q07643 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.73□□□□□ -0.53
Col9a2Q07643 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.73□□□□□ -0.53
Col9a2Q07643 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC11.73□□□□□ -0.53
Col9a2Q07643 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.73□□□□□ -0.53
Col9a2Q07643 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.73□□□□□ -0.53
Col9a2Q07643 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC11.73□□□□□ -0.53
Col9a2Q07643 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Gm9625-201ENSMUST00000180422 955 ntBASIC11.73□□□□□ -0.53
Col9a2Q07643 Gm5801-201ENSMUST00000182247 780 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms