Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.07□□□□□ -0.96
Npas1P97459 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Gm27627-201ENSMUST00000183644 150 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Gm37666-201ENSMUST00000194110 866 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Gm38317-201ENSMUST00000195564 343 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Gm5714-201ENSMUST00000197343 566 ntBASIC9.07□□□□□ -0.96
Npas1P97459 AY036118-201ENSMUST00000200021 923 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.07□□□□□ -0.96
Npas1P97459 Gm18062-201ENSMUST00000208020 547 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Gm18055-201ENSMUST00000208254 547 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Npas1P97459 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Gm43135-201ENSMUST00000196442 3462 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Npas1P97459 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Npas1P97459 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Gm36638-202ENSMUST00000192073 2169 ntBASIC9.07□□□□□ -0.96
Npas1P97459 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Npas1P97459 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Npas1P97459 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Trpv5-202ENSMUST00000193503 2025 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Npas1P97459 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.07□□□□□ -0.96
Npas1P97459 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Npas1P97459 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Npas1P97459 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.07□□□□□ -0.96
Npas1P97459 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Npas1P97459 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Ankk1-201ENSMUST00000034792 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.06□□□□□ -0.96
Npas1P97459 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.06□□□□□ -0.96
Npas1P97459 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.06□□□□□ -0.96
Npas1P97459 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Npas1P97459 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.06□□□□□ -0.96
Npas1P97459 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.06□□□□□ -0.96
Npas1P97459 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.06□□□□□ -0.96
Npas1P97459 Olfml3-204ENSMUST00000169286 874 ntBASIC9.06□□□□□ -0.96
Npas1P97459 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.06□□□□□ -0.96
Npas1P97459 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Gm44967-201ENSMUST00000207047 631 ntBASIC9.06□□□□□ -0.96
Npas1P97459 Gm8913-201ENSMUST00000209491 641 ntBASIC9.06□□□□□ -0.96
Npas1P97459 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Gm6867-201ENSMUST00000219165 425 ntBASIC9.06□□□□□ -0.96
Npas1P97459 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Arhgap45-201ENSMUST00000043311 3499 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.06□□□□□ -0.96
Npas1P97459 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Npas1P97459 Gm37843-201ENSMUST00000195213 2639 ntBASIC9.06□□□□□ -0.96
Npas1P97459 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.06□□□□□ -0.96
Npas1P97459 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Npas1P97459 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Npas1P97459 Gm44189-201ENSMUST00000204387 3083 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms