Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CiitaP79621 Gm11957-201ENSMUST00000118304 779 ntBASIC11.76□□□□□ -0.53
CiitaP79621 Gm5257-201ENSMUST00000121823 790 ntBASIC11.76□□□□□ -0.53
CiitaP79621 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.76□□□□□ -0.53
CiitaP79621 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.76□□□□□ -0.53
CiitaP79621 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.76□□□□□ -0.53
CiitaP79621 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CiitaP79621 Gm42433-201ENSMUST00000196806 940 ntBASIC11.76□□□□□ -0.53
CiitaP79621 Gm18204-201ENSMUST00000209835 793 ntBASIC11.76□□□□□ -0.53
CiitaP79621 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.76□□□□□ -0.53
CiitaP79621 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.76□□□□□ -0.53
CiitaP79621 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
CiitaP79621 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.76□□□□□ -0.53
CiitaP79621 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CiitaP79621 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.76□□□□□ -0.53
CiitaP79621 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
CiitaP79621 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.76□□□□□ -0.53
CiitaP79621 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.75□□□□□ -0.53
CiitaP79621 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.75□□□□□ -0.53
CiitaP79621 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CiitaP79621 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CiitaP79621 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.75□□□□□ -0.53
CiitaP79621 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Gm12947-201ENSMUST00000116114 420 ntBASIC11.75□□□□□ -0.53
CiitaP79621 Gm16518-201ENSMUST00000117960 508 ntBASIC11.75□□□□□ -0.53
CiitaP79621 Gm22344-201ENSMUST00000122642 278 ntBASIC11.75□□□□□ -0.53
CiitaP79621 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.75□□□□□ -0.53
CiitaP79621 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.75□□□□□ -0.53
CiitaP79621 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.75□□□□□ -0.53
CiitaP79621 Gm44640-201ENSMUST00000206894 247 ntBASIC11.75□□□□□ -0.53
CiitaP79621 Gm45085-201ENSMUST00000209100 441 ntBASIC11.75□□□□□ -0.53
CiitaP79621 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.75□□□□□ -0.53
CiitaP79621 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.75□□□□□ -0.53
CiitaP79621 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.75□□□□□ -0.53
CiitaP79621 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.75□□□□□ -0.53
CiitaP79621 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CiitaP79621 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.75□□□□□ -0.53
CiitaP79621 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.75□□□□□ -0.53
CiitaP79621 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CiitaP79621 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CiitaP79621 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.74□□□□□ -0.53
CiitaP79621 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.74□□□□□ -0.53
CiitaP79621 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Gm11979-201ENSMUST00000119629 743 ntBASIC11.74□□□□□ -0.53
CiitaP79621 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.74□□□□□ -0.53
CiitaP79621 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.74□□□□□ -0.53
CiitaP79621 Gm24346-201ENSMUST00000158712 194 ntBASIC11.74□□□□□ -0.53
CiitaP79621 Gm22876-201ENSMUST00000175450 298 ntBASIC11.74□□□□□ -0.53
CiitaP79621 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Gm18801-201ENSMUST00000186616 536 ntBASIC11.74□□□□□ -0.53
CiitaP79621 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.74□□□□□ -0.53
CiitaP79621 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.74□□□□□ -0.53
CiitaP79621 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.74□□□□□ -0.53
CiitaP79621 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.74□□□□□ -0.53
CiitaP79621 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.74□□□□□ -0.53
CiitaP79621 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms