Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm38268-201ENSMUST00000195813 193 ntBASIC10.79□□□□□ -0.68
Sox18P43680 Gm31274-201ENSMUST00000197356 229 ntBASIC10.79□□□□□ -0.68
Sox18P43680 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.79□□□□□ -0.68
Sox18P43680 Gm19174-201ENSMUST00000216944 956 ntBASIC10.79□□□□□ -0.68
Sox18P43680 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.79□□□□□ -0.68
Sox18P43680 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.79□□□□□ -0.68
Sox18P43680 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.79□□□□□ -0.68
Sox18P43680 Gm26782-203ENSMUST00000227103 751 ntBASIC10.79□□□□□ -0.68
Sox18P43680 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox18P43680 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Sox18P43680 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sox18P43680 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC10.79□□□□□ -0.68
Sox18P43680 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Gm12586-201ENSMUST00000117328 1316 ntBASIC10.79□□□□□ -0.68
Sox18P43680 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox18P43680 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC10.79□□□□□ -0.68
Sox18P43680 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox18P43680 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.78□□□□□ -0.68
Sox18P43680 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sox18P43680 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.78□□□□□ -0.68
Sox18P43680 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Sox18P43680 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.78□□□□□ -0.68
Sox18P43680 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.78□□□□□ -0.68
Sox18P43680 Gm13192-201ENSMUST00000101199 208 ntBASIC10.78□□□□□ -0.68
Sox18P43680 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Gm12470-201ENSMUST00000117239 1049 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Gm10443-201ENSMUST00000119024 210 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Gm15746-201ENSMUST00000120684 1027 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.78□□□□□ -0.68
Sox18P43680 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC10.78□□□□□ -0.68
Sox18P43680 Gm15258-201ENSMUST00000153801 741 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Gm22730-201ENSMUST00000158085 171 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC10.78□□□□□ -0.68
Sox18P43680 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.78□□□□□ -0.68
Sox18P43680 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Gm20568-201ENSMUST00000197129 208 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.78□□□□□ -0.68
Sox18P43680 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Gm30055-201ENSMUST00000203175 803 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC10.78□□□□□ -0.68
Sox18P43680 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC10.78□□□□□ -0.68
Sox18P43680 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sox18P43680 Gm29794-201ENSMUST00000218919 1247 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Gm19095-201ENSMUST00000220533 730 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Gm8607-201ENSMUST00000221864 431 ntBASIC10.78□□□□□ -0.68
Sox18P43680 AC183092.2-201ENSMUST00000225542 1153 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Desi2-202ENSMUST00000069568 1193 ntBASIC10.78□□□□□ -0.68
Sox18P43680 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sox18P43680 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sox18P43680 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.78□□□□□ -0.68
Sox18P43680 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sox18P43680 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sox18P43680 Arhgap6-202ENSMUST00000087016 1310 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Sox18P43680 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Sox18P43680 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox18P43680 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms