Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx2P43241 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.33□□□□□ -0.76
Cdx2P43241 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdx2P43241 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx2P43241 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx2P43241 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.33□□□□□ -0.76
Cdx2P43241 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx2P43241 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cdx2P43241 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Gm13192-201ENSMUST00000101199 208 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Gm10443-201ENSMUST00000119024 210 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Gm12736-201ENSMUST00000119330 236 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Gm14148-201ENSMUST00000122433 1008 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.32□□□□□ -0.76
Cdx2P43241 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Gm20091-201ENSMUST00000179683 189 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Gm29304-201ENSMUST00000186555 695 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Cdx2P43241 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC10.32□□□□□ -0.76
Cdx2P43241 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.32□□□□□ -0.76
Cdx2P43241 Gm29223-201ENSMUST00000188867 695 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Gm37921-201ENSMUST00000194333 695 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Gm20568-201ENSMUST00000197129 208 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Gm42859-201ENSMUST00000199572 193 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cdx2P43241 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.32□□□□□ -0.76
Cdx2P43241 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.32□□□□□ -0.76
Cdx2P43241 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cdx2P43241 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx2P43241 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.31□□□□□ -0.76
Cdx2P43241 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Cdx2P43241 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms