Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.56□□□□□ -0.4
Pde6aP27664 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pde6aP27664 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.56□□□□□ -0.4
Pde6aP27664 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.56□□□□□ -0.4
Pde6aP27664 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.56□□□□□ -0.4
Pde6aP27664 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pde6aP27664 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Pde6aP27664 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.56□□□□□ -0.4
Pde6aP27664 Gm20392-201ENSMUST00000173047 701 ntBASIC12.56□□□□□ -0.4
Pde6aP27664 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC12.56□□□□□ -0.4
Pde6aP27664 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.56□□□□□ -0.4
Pde6aP27664 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.56□□□□□ -0.4
Pde6aP27664 Gm37597-201ENSMUST00000191853 382 ntBASIC12.56□□□□□ -0.4
Pde6aP27664 Gm18466-201ENSMUST00000209147 499 ntBASIC12.56□□□□□ -0.4
Pde6aP27664 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pde6aP27664 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Pde6aP27664 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pde6aP27664 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pde6aP27664 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.56□□□□□ -0.4
Pde6aP27664 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6aP27664 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pde6aP27664 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.55□□□□□ -0.4
Pde6aP27664 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.55□□□□□ -0.4
Pde6aP27664 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pde6aP27664 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pde6aP27664 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pde6aP27664 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Gm23061-201ENSMUST00000102348 116 ntBASIC12.55□□□□□ -0.4
Pde6aP27664 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.55□□□□□ -0.4
Pde6aP27664 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.55□□□□□ -0.4
Pde6aP27664 Gm9574-201ENSMUST00000173127 845 ntBASIC12.55□□□□□ -0.4
Pde6aP27664 Gm26119-201ENSMUST00000175601 104 ntBASIC12.55□□□□□ -0.4
Pde6aP27664 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pde6aP27664 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.55□□□□□ -0.4
Pde6aP27664 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pde6aP27664 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pde6aP27664 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.55□□□□□ -0.4
Pde6aP27664 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Pde6aP27664 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.55□□□□□ -0.4
Pde6aP27664 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6aP27664 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pde6aP27664 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
Pde6aP27664 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.54□□□□□ -0.4
Pde6aP27664 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.54□□□□□ -0.4
Pde6aP27664 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.54□□□□□ -0.4
Pde6aP27664 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pde6aP27664 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.54□□□□□ -0.4
Pde6aP27664 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Gm5764-201ENSMUST00000118817 885 ntBASIC12.54□□□□□ -0.4
Pde6aP27664 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Gm9372-201ENSMUST00000168454 430 ntBASIC12.54□□□□□ -0.4
Pde6aP27664 Gm18733-202ENSMUST00000174447 401 ntBASIC12.54□□□□□ -0.4
Pde6aP27664 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pde6aP27664 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC12.54□□□□□ -0.4
Pde6aP27664 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.54□□□□□ -0.4
Pde6aP27664 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.54□□□□□ -0.4
Pde6aP27664 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms