Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxb3P09026 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Mir669p-2-201ENSMUST00000103868 87 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Mir669p-1-201ENSMUST00000103884 87 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm14975-201ENSMUST00000118741 664 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm13674-201ENSMUST00000121276 823 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm24992-201ENSMUST00000157412 130 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm28917-201ENSMUST00000187294 237 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm42617-201ENSMUST00000197640 1229 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm43117-201ENSMUST00000198531 379 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Lect2-202ENSMUST00000225183 823 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 AC164978.2-201ENSMUST00000226645 857 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Hoxb3P09026 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.18□□□□□ -0.62
Hoxb3P09026 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb3P09026 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hoxb3P09026 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxb3P09026 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hoxb3P09026 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.17□□□□□ -0.62
Hoxb3P09026 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.17□□□□□ -0.62
Hoxb3P09026 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm8152-201ENSMUST00000120842 637 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm13460-201ENSMUST00000121274 353 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm12998-201ENSMUST00000122445 789 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hoxb3P09026 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm5976-201ENSMUST00000180794 996 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Mir7011-201ENSMUST00000183768 73 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm28437-201ENSMUST00000190277 783 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm37241-201ENSMUST00000191736 523 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb3P09026 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hoxb3P09026 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC11.17□□□□□ -0.62
Hoxb3P09026 AC161426.1-201ENSMUST00000214137 286 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxb3P09026 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxb3P09026 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Hoxb3P09026 AC107711.3-201ENSMUST00000228939 1035 ntBASIC11.17□□□□□ -0.62
Hoxb3P09026 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms