Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
P04940 AC131586.1-201ENSMUST00000228844 2964 ntBASIC8.78□□□□□ -1
P04940 Gm42521-201ENSMUST00000199190 2040 ntBASIC8.78□□□□□ -1
P04940 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04940 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04940 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04940 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04940 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04940 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC8.78□□□□□ -1
P04940 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04940 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC8.78□□□□□ -1
P04940 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
P04940 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04940 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
P04940 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
P04940 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
P04940 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC8.77□□□□□ -1.01
P04940 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
P04940 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
P04940 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC8.77□□□□□ -1.01
P04940 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC8.77□□□□□ -1.01
P04940 Gm15554-201ENSMUST00000120406 913 ntBASIC8.77□□□□□ -1.01
P04940 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC8.77□□□□□ -1.01
P04940 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Mir3102-201ENSMUST00000175555 104 ntBASIC8.77□□□□□ -1.01
P04940 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
P04940 Gm3508-201ENSMUST00000186012 792 ntBASIC8.77□□□□□ -1.01
P04940 Gm37638-201ENSMUST00000194337 1123 ntBASIC8.77□□□□□ -1.01
P04940 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC8.77□□□□□ -1.01
P04940 Gm5100-201ENSMUST00000195631 589 ntBASIC8.77□□□□□ -1.01
P04940 Gm8365-201ENSMUST00000197334 648 ntBASIC8.77□□□□□ -1.01
P04940 Gm42660-201ENSMUST00000197733 947 ntBASIC8.77□□□□□ -1.01
P04940 Gm8170-201ENSMUST00000218581 945 ntBASIC8.77□□□□□ -1.01
P04940 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC8.77□□□□□ -1.01
P04940 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
P04940 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
P04940 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
P04940 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
P04940 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC8.77□□□□□ -1.01
P04940 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Gm37368-201ENSMUST00000193173 3212 ntBASIC8.77□□□□□ -1.01
P04940 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
P04940 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Gm43937-201ENSMUST00000204640 3122 ntBASIC8.77□□□□□ -1.01
P04940 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC8.77□□□□□ -1.01
P04940 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC8.77□□□□□ -1.01
P04940 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC8.77□□□□□ -1.01
P04940 AC122291.1-201ENSMUST00000228937 5748 ntBASIC8.77□□□□□ -1.01
P04940 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04940 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
P04940 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC8.76□□□□□ -1.01
P04940 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 AC153506.1-201ENSMUST00000218768 2915 ntBASIC8.76□□□□□ -1.01
P04940 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
P04940 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC8.76□□□□□ -1.01
P04940 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
P04940 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Gm13937-201ENSMUST00000121000 988 ntBASIC8.76□□□□□ -1.01
P04940 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC8.76□□□□□ -1.01
P04940 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
P04940 Gm22379-201ENSMUST00000157480 131 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms